sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1YIJ-01548-01563
X
>1Q86-A1548-A1563
X
>3CCV-01548-01563
X
>3F1H-A747-A724
X
>2OTL-01548-01563
X
>1Q86-A273-A355
X
>1VQ9-015-0506
X
>1YJ9-015-0506
X
>3SIU-C10-C20
X
</seq>
<hsp>
0 1:0.307673281436
0 2:0.311595919722
0 3:0.573102322431
0 4:0.261610087077
0 5:0.823734418965
0 6:0.707233429918
0 7:0.797056964471
0 8:0.672195405163
1 2:0.334479541903
1 3:0.544892134373
1 4:0.234403958884
1 5:0.948676190588
1 6:0.871997562658
1 7:0.947809649251
1 8:0.760221607626
2 3:0.627102031994
2 4:0.160120658446
2 5:1.0
2 6:0.723118084226
2 7:0.824540584428
2 8:0.655570335497
3 4:0.593170687054
3 5:0.624844342727
3 6:0.758247847278
3 7:0.694484922452
3 8:0.622741919678
4 5:0.963025218312
4 6:0.776677995908
4 7:0.864201973952
4 8:0.671456645615
5 6:0.748947885429
5 7:0.605625456301
5 8:0.65286645906
6 7:0.260335145097
6 8:0.387882912975
7 8:0.367768381761
</hsp>