sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3DIL-A80-A114
X
>3DIY-A80-A114
X
>3OHZ-A253-A276
X
>1YJW-0231-0257
X
>3I56-0231-0257
X
>3CCU-0231-0257
X
>1VQ9-0231-0257
X
</seq>
<hsp>
0 1:0.0188432510292
0 2:0.906095125666
0 3:0.961870890628
0 4:0.998286149923
0 5:0.987025493092
0 6:0.982155821763
1 2:0.906060403687
1 3:0.962874526781
1 4:0.999999964876
1 5:0.988350546836
1 6:0.983340209542
2 3:0.0884045602194
2 4:0.128294355951
2 5:0.111588890983
2 6:0.0989876293175
3 4:0.0591113356661
3 5:0.0420560880527
3 6:0.0455651702095
4 5:0.0298603191578
4 6:0.0338826653908
5 6:0.025927856718
</hsp>