sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5H-51152-51251
X
>3KNK-A1033-A1080
X
>3F1F-A1046-A1145
X
>3F1H-A1046-A1145
X
>3OI1-A1028-A1075
X
>3OHJ-A1028-A1075
X
>3OH7-A1028-A1075
X
>2J03-A1028-A1075
X
</seq>
<hsp>
0 1:0.999984469423
0 2:0.515466546817
0 3:0.524277753395
0 4:0.584375141292
0 5:0.629202447379
0 6:0.600658089111
0 7:0.608956084278
1 2:0.688731841393
1 3:0.682220457358
1 4:0.610527305615
1 5:0.58183425326
1 6:0.615514728656
1 7:0.602269330531
2 3:0.0175952575725
2 4:0.231897566261
2 5:0.356920370351
2 6:0.351775470142
2 7:0.300934100353
3 4:0.222099380891
3 5:0.3521898143
3 6:0.346127546415
3 7:0.296192052865
4 5:0.246756364125
4 6:0.206439681155
4 7:0.292924307367
5 6:0.132134944127
5 7:0.262981645097
6 7:0.295558685511
</hsp>