sequences=18
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5H-51344-51366
X
>2PXQ-B34-B17
X
>1KD3-A6-B3
X
>3PDR-X10-X145
X
>3U5D-12040-12019
X
>1KD3-B6-A3
X
>3U5H-52044-52023
X
>3U5D-11338-11360
X
>1N32-A1251-A1236
X
>2V3C-M77-M60
X
>2ZJR-X1395-X1433
X
>3U5D-1810-1837
X
>2PXV-B34-B17
X
>2PXD-B34-B17
X
>2UUB-A1251-A1236
X
>1XMQ-A1246-A1231
X
>2PXT-B34-B17
X
>2PXL-B34-B17
X
</seq>
<hsp>
0 1:0.539534430807
0 2:0.185234500964
0 3:0.384522155011
0 4:0.269247085461
0 5:0.175319528566
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16 17:0.0950181959983
</hsp>