sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2UUA-A1226-A1330
X
>2VQE-A1226-A1330
X
>1XMQ-A1221-A1325
X
>3KNH-A664-A766
X
>3F1E-A872-A789
X
>3F1G-A872-A789
X
>2J02-A872-A789
X
>3R8O-A898-A809
X
>2VQE-A872-A789
X
>2UUA-A872-A789
X
>1FJG-A872-A789
X
>2VQF-A872-A789
X
>1N32-A872-A789
X
</seq>
<hsp>
0 1:0.144029512592
0 2:0.148883099774
0 3:0.343229445161
0 4:0.688875964467
0 5:0.686947392467
0 6:0.734005200183
0 7:0.745461567279
0 8:0.781500691658
0 9:0.873578980524
0 10:0.75493205188
0 11:0.807749634936
0 12:0.783932574735
1 2:0.0554807546694
1 3:0.433643999571
1 4:0.81069507722
1 5:0.809066441949
1 6:0.850645888074
1 7:0.863148541988
1 8:0.906515466088
1 9:0.999998171413
1 10:0.878821623406
1 11:0.933254552686
1 12:0.910791804519
2 3:0.425406223203
2 4:0.808062805426
2 5:0.805942572546
2 6:0.84079094799
2 7:0.857624368062
2 8:0.896603232386
2 9:0.991205118872
2 10:0.868118980742
2 11:0.923632711601
2 12:0.900613299445
3 4:0.459583198198
3 5:0.4556594731
3 6:0.490956427205
3 7:0.496016736655
3 8:0.541214790259
3 9:0.635257031679
3 10:0.522762093662
3 11:0.565226942162
3 12:0.551911343941
4 5:0.0116554777186
4 6:0.131933114878
4 7:0.105613953809
4 8:0.16317583112
4 9:0.238296773047
4 10:0.158101027668
4 11:0.18838334966
4 12:0.178118121925
5 6:0.127564452975
5 7:0.101507154066
5 8:0.156352270088
5 9:0.233751123877
5 10:0.15161794364
5 11:0.182061316729
5 12:0.171507383186
6 7:0.100528361373
6 8:0.116405183421
6 9:0.201901086935
6 10:0.105736681964
6 11:0.149364559231
6 12:0.140849342682
7 8:0.122862148848
7 9:0.184549238437
7 10:0.134000469423
7 11:0.140513418597
7 12:0.151225024139
8 9:0.104811951435
8 10:0.0727560894645
8 11:0.0469859496245
8 12:0.0532543789493
9 10:0.147225973544
9 11:0.0741718203235
9 12:0.108789210149
10 11:0.0859452828452
10 12:0.0529602967789
11 12:0.0532895316372
</hsp>