sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2GOZ-A17-B6
X
>2ZJR-X1217-X1212
X
>3R8N-A128-A231
X
>3KNK-A1207-A573
X
>2OEU-A17-B6
X
>2J01-A1202-A573
X
>2J03-A1202-A573
X
>3U5F-61131-616
X
</seq>
<hsp>
0 1:0.999999599444
0 2:0.639175406476
0 3:0.946663924769
0 4:0.232888199284
0 5:0.883693065692
0 6:0.8865424986
0 7:0.902946068638
1 2:0.896284567532
1 3:0.2259266417
1 4:0.971471562866
1 5:0.211707352201
1 6:0.210872057324
1 7:0.207004219208
2 3:0.761937622586
2 4:0.470741094945
2 5:0.782881168155
2 6:0.787608978924
2 7:0.765381000807
3 4:0.900955218575
3 5:0.193738955497
3 6:0.198248957329
3 7:0.150178217839
4 5:0.859219291414
4 6:0.862081768701
4 7:0.872802266813
5 6:0.0136163096742
5 7:0.0873937594251
6 7:0.0937109671126
</hsp>