sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3F1F-A1955-A1939
X
>3OHJ-A2172-A2120
X
>1FJG-A467-A435
X
>2YIE-Z19-Z11
X
>1Q82-A705-A698
X
>1U0B-A58-A50
X
>2V3C-M37-M9
X
>3KNH-A38-A380
X
>2J02-A920-A1209
X
>3CD6-0275-0353
X
>1VQ9-01475-01628
X
</seq>
<hsp>
0 1:0.366174371392
0 2:0.38065910569
0 3:0.429293550948
0 4:0.409935202992
0 5:0.600317331074
0 6:0.994921673388
0 7:0.532558489767
0 8:0.786777731356
0 9:0.898271039945
0 10:0.778883402048
1 2:0.323804953703
1 3:0.231166813772
1 4:0.555210570595
1 5:0.523511203719
1 6:0.999994999716
1 7:0.492763249599
1 8:0.575458693501
1 9:0.79453988667
1 10:0.648294532223
2 3:0.180339804455
2 4:0.380133280094
2 5:0.304662316433
2 6:0.802405358341
2 7:0.287254858206
2 8:0.506946180471
2 9:0.590021950937
2 10:0.495278539099
3 4:0.51073255758
3 5:0.314248673131
3 6:0.857445996612
3 7:0.351694740952
3 8:0.426632792071
3 9:0.587675164089
3 10:0.486076682853
4 5:0.599409181181
4 6:0.718327435251
4 7:0.347596154863
4 8:0.720702902957
4 9:0.752339506997
4 10:0.591231088723
5 6:0.853547773841
5 7:0.38780361705
5 8:0.519204526646
5 9:0.391534602357
5 10:0.496991440691
6 7:0.610356565108
6 8:0.644611280073
6 9:0.71847525085
6 10:0.50848746121
7 8:0.459530993732
7 9:0.460033580117
7 10:0.308550551326
8 9:0.5095644367
8 10:0.295030514816
9 10:0.370119135006
</hsp>