sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1YIJ-0479-0489
X
>1NJI-A664-A658
X
>3CD6-02177-02196
X
>2VQF-A1320-A911
X
>3CCQ-01512-01526
X
>3G6E-090-067
X
>3OHY-A657-A689
X
>3CCE-01512-01526
X
>1Q86-A1945-A1935
X
>3CME-928-952
X
>1YI2-0159-0152
X
</seq>
<hsp>
0 1:0.655336312795
0 2:0.575941573945
0 3:0.754900185804
0 4:0.412149353195
0 5:0.671110552045
0 6:0.388560509024
0 7:0.313845051779
0 8:0.461621471187
0 9:0.653774664064
0 10:0.954061650082
1 2:0.730922463265
1 3:0.46462120431
1 4:0.672578878549
1 5:0.359630954291
1 6:0.769282627551
1 7:0.56107169914
1 8:0.528021793397
1 9:0.702203238353
1 10:0.780878270465
2 3:0.500005286851
2 4:0.763861237638
2 5:0.587854808346
2 6:0.457850414142
2 7:0.512619023651
2 8:0.564413819576
2 9:0.86438086934
2 10:0.569493810145
3 4:0.73190677467
3 5:0.330182751136
3 6:0.680999807156
3 7:0.544016943373
3 8:0.527248864256
3 9:0.749898100679
3 10:0.447774666672
4 5:0.660740655936
4 6:0.487695584666
4 7:0.276500782411
4 8:0.40694372796
4 9:0.54522365389
4 10:0.99998389518
5 6:0.68750077798
5 7:0.469843717752
5 8:0.438514661248
5 9:0.808839775416
5 10:0.645485146346
6 7:0.334681300176
6 8:0.360194213899
6 9:0.696298921915
6 10:0.824185296613
7 8:0.260302522376
7 9:0.597851518221
7 10:0.797619706608
8 9:0.696156470761
8 10:0.811957887461
9 10:0.856541772017
</hsp>