sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1QU2-T32-T38
X
>1NUV-C5-D6
X
>1EUY-B41-B23
X
>3U5F-6621-6968
X
>3LOA-A5-B16
X
>3F1H-A982-A971
X
>3F1F-A982-A971
X
>3NDB-M78-M97
X
>2ZZN-D30-D36
X
</seq>
<hsp>
0 1:0.423090577011
0 2:0.374524569658
0 3:0.919365942597
0 4:0.444442686294
0 5:0.996466357847
0 6:1.0
0 7:0.79458394254
0 8:0.712866723774
1 2:0.19355289415
1 3:0.656618303303
1 4:0.229689457956
1 5:0.779043810667
1 6:0.782089239515
1 7:0.519754565456
1 8:0.516131655548
2 3:0.605277098581
2 4:0.270256933407
2 5:0.709685508789
2 6:0.714402053043
2 7:0.455742349329
2 8:0.466031857156
3 4:0.645130384372
3 5:0.204631287824
3 6:0.208070748753
3 7:0.186860606392
3 8:0.370440414511
4 5:0.717887022778
4 6:0.718163425616
4 7:0.520354246109
4 8:0.394053645051
5 6:0.0170898996286
5 7:0.309855780703
5 8:0.377464843321
6 7:0.316112061948
6 8:0.37346487887
7 8:0.315646291346
</hsp>