sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2O3V-A7-B13
X
>2O3Y-A7-B13
X
>3FO6-A11-A29
X
>2EET-A11-A29
X
>2EES-A11-A29
X
>2G9C-A11-A29
X
>3GER-A11-A29
X
>2XNZ-A10-A28
X
</seq>
<hsp>
0 1:0.834633217333
0 2:1.0
0 3:0.748659452038
0 4:0.88771947879
0 5:0.736654274413
0 6:0.771410305197
0 7:0.817718415535
1 2:0.361799129872
1 3:0.272942476822
1 4:0.213703250255
1 5:0.349208043576
1 6:0.253362761112
1 7:0.274429753124
2 3:0.335450194041
2 4:0.45583312775
2 5:0.370845370073
2 6:0.317094880011
2 7:0.288856175555
3 4:0.295177434201
3 5:0.159603160841
3 6:0.111079662744
3 7:0.127963558686
4 5:0.341700488892
4 6:0.264102429052
4 7:0.285325008512
5 6:0.105824133783
5 7:0.14059672585
6 7:0.0903950639933
</hsp>