sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNI-A2798-A2
X
>2ZJR-X839-X786
X
>3G71-9107-972
X
>1TFW-F5-I4
X
>1YIT-9107-972
X
>1YJ9-9107-972
X
>3G6E-9107-972
X
>1YI2-9107-972
X
</seq>
<hsp>
0 1:1.0
0 2:0.955138686264
0 3:0.609125714445
0 4:0.926293637184
0 5:0.931179457856
0 6:0.961276645366
0 7:0.940052024755
1 2:0.115646813956
1 3:0.455386622871
1 4:0.169958793448
1 5:0.210657221729
1 6:0.109894939796
1 7:0.154355245024
2 3:0.400098617288
2 4:0.13487798196
2 5:0.15487169485
2 6:0.114990637952
2 7:0.11086862082
3 4:0.408952495794
3 5:0.392774076532
3 6:0.432575050653
3 7:0.400072422959
4 5:0.0977206688849
4 6:0.13039565794
4 7:0.104009255443
5 6:0.191940943354
5 7:0.146375695261
6 7:0.0727850838806
</hsp>