Doublet Group distance statistics: 48424

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Distances from reference structure (by RMSD)

1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 2, 0, 1, 0, 0, 0, 1, 0, 0,

RMS Distances matrix

Distances from reference structure (by atoms)

Atom	Chain	Distances
N4	B	0, 0.796, 2.718, 4.640, 4.278 max_d=4.278 avg_d=2.718 std_dev=1.922
N3	B	0, 0.937, 2.969, 5.001, 4.608 max_d=4.608 avg_d=2.969 std_dev=2.032
O2	B	0, 1.076, 3.314, 5.552, 5.116 max_d=5.116 avg_d=3.314 std_dev=2.238
N4	A	0, 0.511, 2.757, 5.002, 4.802 max_d=4.802 avg_d=2.757 std_dev=2.246
C4	B	0, 0.980, 3.345, 5.709, 5.260 max_d=5.260 avg_d=3.345 std_dev=2.364
N3	A	0, 0.538, 2.940, 5.341, 5.103 max_d=5.103 avg_d=2.940 std_dev=2.401
C2	B	0, 1.116, 3.656, 6.197, 5.710 max_d=5.710 avg_d=3.656 std_dev=2.541
O2	A	0, 0.587, 3.199, 5.811, 5.526 max_d=5.526 avg_d=3.199 std_dev=2.612
C4	A	0, 0.612, 3.333, 6.055, 5.743 max_d=5.743 avg_d=3.333 std_dev=2.722
C2	A	0, 0.655, 3.571, 6.488, 6.129 max_d=6.129 avg_d=3.571 std_dev=2.917
C5	B	0, 1.276, 4.703, 8.131, 7.489 max_d=7.489 avg_d=4.703 std_dev=3.427
N1	B	0, 1.403, 5.037, 8.670, 7.987 max_d=7.987 avg_d=5.037 std_dev=3.634
C5	A	0, 0.853, 4.649, 8.445, 7.900 max_d=7.900 avg_d=4.649 std_dev=3.796
N1	A	0, 0.902, 4.917, 8.931, 8.332 max_d=8.332 avg_d=4.917 std_dev=4.014
C6	B	0, 1.488, 5.576, 9.663, 8.900 max_d=8.900 avg_d=5.576 std_dev=4.087
C1'	B	0, 1.630, 6.026, 10.422, 9.600 max_d=9.600 avg_d=6.026 std_dev=4.396
C6	A	0, 1.006, 5.476, 9.947, 9.260 max_d=9.260 avg_d=5.476 std_dev=4.470
C2'	B	0, 1.744, 6.397, 11.050, 10.223 max_d=10.223 avg_d=6.397 std_dev=4.653
O2'	B	0, 1.768, 6.511, 11.253, 10.432 max_d=10.432 avg_d=6.511 std_dev=4.742
C1'	A	0, 1.071, 5.837, 10.604, 9.886 max_d=9.886 avg_d=5.837 std_dev=4.766
C2'	A	0, 1.265, 6.650, 12.034, 11.187 max_d=11.187 avg_d=6.650 std_dev=5.384
O2'	A	0, 1.312, 6.708, 12.104, 11.346 max_d=11.346 avg_d=6.708 std_dev=5.396
O4'	B	0, 1.931, 7.495, 13.059, 12.030 max_d=12.030 avg_d=7.495 std_dev=5.564
O4'	A	0, 1.364, 7.114, 12.864, 11.965 max_d=11.965 avg_d=7.114 std_dev=5.750
C3'	B	0, 2.084, 7.934, 13.784, 12.737 max_d=12.737 avg_d=7.934 std_dev=5.850
C4'	B	0, 2.185, 8.589, 14.994, 13.824 max_d=13.824 avg_d=8.589 std_dev=6.404
C3'	A	0, 1.633, 8.118, 14.603, 13.511 max_d=13.511 avg_d=8.118 std_dev=6.485
C4'	A	0, 1.697, 8.384, 15.071, 13.985 max_d=13.985 avg_d=8.384 std_dev=6.687
O3'	B	0, 2.315, 9.034, 15.752, 14.572 max_d=14.572 avg_d=9.034 std_dev=6.718
O5'	B	0, 2.386, 9.162, 15.939, 14.751 max_d=14.751 avg_d=9.162 std_dev=6.776
OP2	B	0, 2.852, 9.646, 16.439, 15.277 max_d=15.277 avg_d=9.646 std_dev=6.794
O5'	A	0, 1.955, 9.135, 16.315, 15.104 max_d=15.104 avg_d=9.135 std_dev=7.180
C5'	B	0, 2.455, 9.786, 17.117, 15.763 max_d=15.763 avg_d=9.786 std_dev=7.331
OP2	A	0, 2.150, 9.531, 16.912, 15.687 max_d=15.687 avg_d=9.531 std_dev=7.381
O3'	A	0, 1.913, 9.301, 16.688, 15.448 max_d=15.448 avg_d=9.301 std_dev=7.387
P	B	0, 2.751, 10.254, 17.756, 16.467 max_d=16.467 avg_d=10.254 std_dev=7.503
C5'	A	0, 2.019, 9.587, 17.156, 15.876 max_d=15.876 avg_d=9.587 std_dev=7.568
P	A	0, 2.248, 10.211, 18.174, 16.845 max_d=16.845 avg_d=10.211 std_dev=7.963
OP1	B	0, 2.979, 11.872, 20.766, 19.213 max_d=19.213 avg_d=11.872 std_dev=8.894
OP1	A	0, 2.655, 11.757, 20.859, 19.280 max_d=19.280 avg_d=11.757 std_dev=9.102

Atoms distances (summary)

Atoms distances Chain-A - Chain-A

Atom	C1'	C2	C2'	C3'	C4	C4'	C5	C5'	C6	N1	N3	N4	O2	O2'	O3'	O4'	O5'	OP1	OP2	P
C1'	0.00	0.00	0.00	0.01	0.00	0.00	0.00	0.02	0.00	0.00	0.00	0.00	0.01	0.01	0.01	0.00	0.05	0.05	0.07	0.05
C2	0.00	0.00	0.05	0.08	0.00	0.03	0.00	0.07	0.00	0.00	0.00	0.00	0.00	0.02	0.07	0.02	0.15	0.16	0.23	0.16
C2'	0.00	0.05	0.00	0.00	0.02	0.00	0.01	0.01	0.02	0.01	0.04	0.02	0.07	0.00	0.01	0.00	0.04	0.06	0.06	0.04
C3'	0.01	0.08	0.00	0.00	0.09	0.00	0.07	0.01	0.05	0.05	0.09	0.10	0.07	0.00	0.00	0.00	0.03	0.06	0.04	0.04
C4	0.00	0.00	0.02	0.09	0.00	0.07	0.00	0.15	0.00	0.00	0.00	0.00	0.00	0.02	0.10	0.01	0.23	0.29	0.35	0.28
C4'	0.00	0.03	0.00	0.00	0.07	0.00	0.09	0.00	0.08	0.04	0.04	0.07	0.01	0.01	0.01	0.00	0.00	0.04	0.00	0.00
C5	0.00	0.00	0.01	0.07	0.00	0.09	0.00	0.18	0.00	0.00	0.00	0.00	0.00	0.02	0.08	0.03	0.25	0.30	0.35	0.30
C5'	0.02	0.07	0.01	0.01	0.15	0.00	0.18	0.00	0.16	0.09	0.11	0.16	0.03	0.01	0.01	0.01	0.00	0.03	0.01	0.00
C6	0.00	0.00	0.02	0.05	0.00	0.08	0.00	0.16	0.00	0.00	0.00	0.00	0.00	0.02	0.05	0.04	0.21	0.23	0.24	0.23
N1	0.00	0.00	0.01	0.05	0.00	0.04	0.00	0.09	0.00	0.00	0.00	0.00	0.00	0.02	0.05	0.01	0.14	0.15	0.18	0.15
N3	0.00	0.00	0.04	0.09	0.00	0.04	0.00	0.11	0.00	0.00	0.00	0.00	0.00	0.02	0.10	0.01	0.19	0.23	0.30	0.22
N4	0.00	0.00	0.02	0.10	0.00	0.07	0.00	0.16	0.00	0.00	0.00	0.00	0.00	0.02	0.12	0.01	0.24	0.33	0.40	0.32
O2	0.01	0.00	0.07	0.07	0.00	0.01	0.00	0.03	0.00	0.00	0.00	0.00	0.00	0.02	0.06	0.04	0.11	0.12	0.19	0.12
O2'	0.01	0.02	0.00	0.00	0.02	0.01	0.02	0.01	0.02	0.02	0.02	0.02	0.02	0.00	0.03	0.02	0.02	0.05	0.04	0.03
O3'	0.01	0.07	0.01	0.00	0.10	0.01	0.08	0.01	0.05	0.05	0.10	0.12	0.06	0.03	0.00	0.01	0.03	0.07	0.05	0.04
O4'	0.00	0.02	0.00	0.00	0.01	0.00	0.03	0.01	0.04	0.01	0.01	0.01	0.04	0.02	0.01	0.00	0.02	0.02	0.01	0.01
O5'	0.05	0.15	0.04	0.03	0.23	0.00	0.25	0.00	0.21	0.14	0.19	0.24	0.11	0.02	0.03	0.02	0.00	0.01	0.00	0.00
OP1	0.05	0.16	0.06	0.06	0.29	0.04	0.30	0.03	0.23	0.15	0.23	0.33	0.12	0.05	0.07	0.02	0.01	0.00	0.00	0.00
OP2	0.07	0.23	0.06	0.04	0.35	0.00	0.35	0.01	0.24	0.18	0.30	0.40	0.19	0.04	0.05	0.01	0.00	0.00	0.00	0.00
P	0.05	0.16	0.04	0.04	0.28	0.00	0.30	0.00	0.23	0.15	0.22	0.32	0.12	0.03	0.04	0.01	0.00	0.00	0.00	0.00

Atoms distances Chain-A - Chain-B

Atom	C1'	C2	C2'	C3'	C4	C4'	C5	C5'	C6	N1	N3	N4	O2	O2'	O3'	O4'	O5'	OP1	OP2	P
C1'	0.26	0.31	0.37	0.18	1.25	0.23	1.14	0.25	0.71	0.32	0.81	1.76	0.31	0.86	0.29	0.22	0.54	0.69	1.16	0.79
C2	0.55	0.18	0.71	0.38	1.21	0.43	1.11	0.21	0.57	0.17	0.61	1.88	0.77	1.27	0.55	0.39	0.42	0.61	1.14	0.73
C2'	0.16	0.45	0.24	0.12	1.34	0.16	1.21	0.24	0.79	0.42	0.96	1.81	0.13	0.72	0.21	0.17	0.56	0.68	1.17	0.80
C3'	0.32	0.13	0.42	0.22	0.93	0.29	0.85	0.14	0.47	0.14	0.55	1.38	0.34	0.86	0.35	0.25	0.33	0.47	0.92	0.57
C4	1.35	1.25	1.46	1.04	0.13	1.03	0.19	0.65	0.37	0.98	0.74	0.75	1.90	1.90	1.14	1.07	0.30	0.19	0.61	0.24
C4'	0.30	0.18	0.39	0.21	0.91	0.26	0.85	0.20	0.50	0.20	0.54	1.34	0.36	0.80	0.30	0.24	0.41	0.56	0.96	0.63
C5	1.27	1.18	1.37	1.00	0.13	0.99	0.11	0.65	0.41	0.94	0.76	0.51	1.73	1.78	1.08	1.03	0.33	0.16	0.51	0.20
C5'	0.57	0.33	0.64	0.41	0.47	0.48	0.46	0.28	0.17	0.27	0.15	0.86	0.70	1.03	0.50	0.48	0.20	0.32	0.68	0.37
C6	0.91	0.70	1.03	0.70	0.39	0.72	0.42	0.42	0.13	0.54	0.25	0.93	1.24	1.47	0.82	0.72	0.19	0.30	0.71	0.36
N1	0.57	0.24	0.71	0.41	0.94	0.45	0.88	0.22	0.42	0.18	0.40	1.53	0.78	1.21	0.56	0.43	0.34	0.52	1.00	0.62
N3	0.98	0.68	1.13	0.73	0.79	0.74	0.77	0.38	0.22	0.50	0.14	1.54	1.41	1.67	0.87	0.73	0.22	0.43	0.95	0.53
N4	1.77	1.87	1.84	1.39	0.59	1.36	0.36	0.94	0.84	1.49	1.45	0.16	2.45	2.21	1.44	1.44	0.58	0.17	0.36	0.18
O2	0.23	0.56	0.33	0.16	1.77	0.21	1.57	0.34	1.03	0.55	1.27	2.39	0.23	0.93	0.26	0.24	0.72	0.85	1.41	1.00
O2'	0.44	0.96	0.29	0.42	1.74	0.37	1.57	0.55	1.18	0.87	1.45	2.16	0.58	0.33	0.22	0.48	0.88	0.94	1.43	1.08
O3'	0.17	0.29	0.26	0.12	1.02	0.18	0.93	0.15	0.57	0.26	0.70	1.42	0.14	0.67	0.22	0.15	0.40	0.51	0.95	0.61
O4'	0.34	0.20	0.44	0.24	0.99	0.29	0.93	0.23	0.55	0.22	0.57	1.45	0.44	0.89	0.33	0.27	0.46	0.62	1.04	0.70
O5'	0.95	0.76	1.01	0.75	0.10	0.80	0.10	0.56	0.28	0.65	0.42	0.45	1.16	1.39	0.83	0.82	0.28	0.10	0.38	0.13
OP1	1.13	1.00	1.14	0.90	0.38	0.98	0.32	0.76	0.58	0.89	0.73	0.14	1.31	1.47	0.94	1.02	0.51	0.26	0.10	0.27
OP2	1.62	1.57	1.63	1.35	0.89	1.39	0.77	1.13	1.04	1.40	1.32	0.56	1.91	1.95	1.37	1.46	0.87	0.55	0.25	0.57
P	1.24	1.13	1.27	1.00	0.45	1.06	0.37	0.82	0.65	1.00	0.86	0.15	1.49	1.61	1.05	1.11	0.55	0.27	0.09	0.29

Atoms distances Chain-B - Chain-B

Atom	C1'	C2	C2'	C3'	C4	C4'	C5	C5'	C6	N1	N3	N4	O2	O2'	O3'	O4'	O5'	OP1	OP2	P
C1'	0.00	0.01	0.00	0.00	0.01	0.00	0.01	0.01	0.00	0.00	0.01	0.01	0.01	0.01	0.01	0.00	0.04	0.06	0.01	0.03
C2	0.01	0.00	0.01	0.03	0.00	0.02	0.00	0.04	0.00	0.00	0.00	0.00	0.00	0.04	0.03	0.01	0.08	0.07	0.06	0.07
C2'	0.00	0.01	0.00	0.00	0.02	0.00	0.03	0.01	0.03	0.01	0.01	0.03	0.04	0.00	0.01	0.00	0.02	0.04	0.04	0.03
C3'	0.00	0.03	0.00	0.00	0.07	0.00	0.09	0.01	0.08	0.04	0.05	0.08	0.03	0.01	0.00	0.00	0.02	0.04	0.05	0.02
C4	0.01	0.00	0.02	0.07	0.00	0.05	0.00	0.08	0.00	0.00	0.00	0.00	0.00	0.02	0.09	0.02	0.11	0.11	0.10	0.12
C4'	0.00	0.02	0.00	0.00	0.05	0.00	0.06	0.00	0.05	0.03	0.03	0.05	0.02	0.03	0.02	0.00	0.01	0.06	0.01	0.01
C5	0.01	0.00	0.03	0.09	0.00	0.06	0.00	0.09	0.00	0.00	0.00	0.00	0.00	0.02	0.11	0.01	0.12	0.11	0.10	0.12
C5'	0.01	0.04	0.01	0.01	0.08	0.00	0.09	0.00	0.08	0.05	0.06	0.09	0.03	0.03	0.02	0.01	0.00	0.07	0.01	0.01
C6	0.00	0.00	0.03	0.08	0.00	0.05	0.00	0.08	0.00	0.00	0.00	0.01	0.00	0.02	0.09	0.01	0.10	0.09	0.06	0.08
N1	0.00	0.00	0.01	0.04	0.00	0.03	0.00	0.05	0.00	0.00	0.00	0.01	0.01	0.00	0.04	0.01	0.07	0.06	0.04	0.05
N3	0.01	0.00	0.01	0.05	0.00	0.03	0.00	0.06	0.00	0.00	0.00	0.00	0.00	0.03	0.05	0.01	0.09	0.09	0.09	0.09
N4	0.01	0.00	0.03	0.08	0.00	0.05	0.00	0.09	0.01	0.01	0.00	0.00	0.00	0.02	0.11	0.02	0.12	0.13	0.13	0.13
O2	0.01	0.00	0.04	0.03	0.00	0.02	0.00	0.03	0.00	0.01	0.00	0.00	0.00	0.08	0.04	0.01	0.06	0.06	0.04	0.05
O2'	0.01	0.04	0.00	0.01	0.02	0.03	0.02	0.03	0.02	0.00	0.03	0.02	0.08	0.00	0.03	0.04	0.01	0.04	0.03	0.01
O3'	0.01	0.03	0.01	0.00	0.09	0.02	0.11	0.02	0.09	0.04	0.05	0.11	0.04	0.03	0.00	0.01	0.03	0.03	0.07	0.02
O4'	0.00	0.01	0.00	0.00	0.02	0.00	0.01	0.01	0.01	0.01	0.01	0.02	0.01	0.04	0.01	0.00	0.04	0.07	0.05	0.04
O5'	0.04	0.08	0.02	0.02	0.11	0.01	0.12	0.00	0.10	0.07	0.09	0.12	0.06	0.01	0.03	0.04	0.00	0.01	0.01	0.00
OP1	0.06	0.07	0.04	0.04	0.11	0.06	0.11	0.07	0.09	0.06	0.09	0.13	0.06	0.04	0.03	0.07	0.01	0.00	0.01	0.00
OP2	0.01	0.06	0.04	0.05	0.10	0.01	0.10	0.01	0.06	0.04	0.09	0.13	0.04	0.03	0.07	0.05	0.01	0.01	0.00	0.00
P	0.03	0.07	0.03	0.02	0.12	0.01	0.12	0.01	0.08	0.05	0.09	0.13	0.05	0.01	0.02	0.04	0.00	0.00	0.00	0.00