sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1QBP-A8-B7
X
>1QBP-C8-D7
X
>3U5D-325-353
X
>3U5H-725-753
X
>1ET4-A28-A14
X
>1ET4-C28-C14
X
>1ET4-D28-D14
X
>1DDY-E28-E14
X
>1ET4-E28-E14
X
>1ET4-B28-B14
X
>1DDY-A28-A14
X
</seq>
<hsp>
0 1:0.314866562349
0 2:0.595622421614
0 3:0.926390914012
0 4:0.599677850453
0 5:0.659566775794
0 6:0.749203562094
0 7:0.657110231471
0 8:0.644202303933
0 9:0.651364840213
0 10:0.740598871336
1 2:0.498142537197
1 3:0.771009365336
1 4:0.604020173048
1 5:0.668076212563
1 6:0.726515301647
1 7:0.641508849442
1 8:0.562426580155
1 9:0.676936666241
1 10:0.689853193226
2 3:0.650891792257
2 4:0.481434434531
2 5:0.515528803547
2 6:0.605030704214
2 7:0.636260676225
2 8:0.476557874822
2 9:0.642353760074
2 10:0.557005239492
3 4:0.647662276068
3 5:0.67662923474
3 6:0.651606709016
3 7:0.999996514627
3 8:0.659578265505
3 9:0.922878243254
3 10:0.875558938629
4 5:0.262656668923
4 6:0.214569066848
4 7:0.496638449867
4 8:0.230075743273
4 9:0.346983422639
4 10:0.423574117991
5 6:0.224630851759
5 7:0.582399531821
5 8:0.325094480107
5 9:0.405594550451
5 10:0.394250065739
6 7:0.552067969542
6 8:0.248860180681
6 9:0.3758300931
6 10:0.400713027103
7 8:0.403164950012
7 9:0.386342868707
7 10:0.400733223776
8 9:0.305748874111
8 10:0.281486901508
9 10:0.262413340639
</hsp>