sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8T-A1879-A1847
X
>3OHK-A574-A585
X
>3OHJ-A574-A585
X
>3KNI-A574-A585
X
>3KNI-A2357-A2409
X
>3R8S-A564-A575
X
>3F1H-A583-A594
X
>3F1F-A583-A594
X
</seq>
<hsp>
0 1:0.977246192272
0 2:0.909667738532
0 3:0.946042428537
0 4:0.777015416595
0 5:1.0
0 6:0.902244024871
0 7:0.930654196077
1 2:0.102254725545
1 3:0.85240870658
1 4:0.382606082855
1 5:0.284791221594
1 6:0.549869076458
1 7:0.528344836426
2 3:0.817022404831
2 4:0.338943468567
2 5:0.270259486167
2 6:0.510218221878
2 7:0.49140078203
3 4:0.949507324021
3 5:0.776240499995
3 6:0.769486448652
3 7:0.783769818988
4 5:0.417365153978
4 6:0.464848284502
4 7:0.457639800571
5 6:0.40696189638
5 7:0.385483623603
6 7:0.0538420378756
</hsp>