sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHC-A69-A84
X
>3OHD-A69-A84
X
>2PN3-B6-A16
X
>3OHY-A69-A84
X
>3OI0-A69-A84
X
>2NOK-B6-A16
X
</seq>
<hsp>
0 1:0.0177376249233
0 2:0.5012625914
0 3:0.40279056894
0 4:0.404230505249
0 5:0.999997406618
1 2:0.490783555011
1 3:0.395564159589
1 4:0.396369966418
1 5:0.99027295451
2 3:0.626281534554
2 4:0.612326330055
2 5:0.876072980028
3 4:0.023513836325
3 5:0.895734275592
4 5:0.877903952305
</hsp>