sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8S-A1973-A1779
X
>3F1H-A1974-A1789
X
>3F1F-A1974-A1789
X
>3U5F-61771-6987
X
>3OHJ-A1428-A1499
X
>2J01-A1428-A1499
X
>3R8N-A1512-A780
X
>3R8O-A1512-A780
X
>3OHZ-A1428-A1499
X
>3OI1-A1428-A1499
X
>3U5D-11315-1916
X
>3F1F-A1498-A1577
X
</seq>
<hsp>
0 1:0.458809631806
0 2:0.458511191983
0 3:0.974651182134
0 4:1.0
0 5:0.991415996038
0 6:0.989072107227
0 7:0.958816230622
0 8:0.993356979051
0 9:0.997321627742
0 10:0.992270147967
0 11:0.936102636624
1 2:0.00385930550334
1 3:0.856802966355
1 4:0.936092307937
1 5:0.906184626434
1 6:0.873313453186
1 7:0.873856737046
1 8:0.926930421837
1 9:0.930973857671
1 10:0.915977913486
1 11:0.887796280972
2 3:0.857997448214
2 4:0.935063060036
2 5:0.905183936514
2 6:0.874437116419
2 7:0.874745471555
2 8:0.925854920909
2 9:0.929904632976
2 10:0.916943962608
2 11:0.886847389756
3 4:0.963761430529
3 5:0.963433085097
3 6:0.0329222360901
3 7:0.109143095202
3 8:0.968891310787
3 9:0.973400063067
3 10:0.198640537304
3 11:0.93002549639
4 5:0.0712375735236
4 6:0.94667393292
4 7:0.94251597366
4 8:0.0255517459759
4 9:0.0242396782144
4 10:0.876284069531
4 11:0.10198745413
5 6:0.947308362889
5 7:0.944576610999
5 8:0.0607050382294
5 9:0.0615552251917
5 10:0.876778245822
5 11:0.133062963303
6 7:0.101497316658
6 8:0.952525640171
6 9:0.956811600434
6 10:0.189244366348
6 11:0.913680282638
7 8:0.949169407767
7 9:0.953303900208
7 10:0.195624499286
7 11:0.917077729763
8 9:0.00975273430271
8 10:0.882263292259
8 11:0.103107135294
9 10:0.885277096842
9 11:0.103848909503
10 11:0.844598453828
</hsp>