sequences=10
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3F1G-A897-A1475
X
>2UUA-A897-A1475
X
>3F1E-A897-A1475
X
>2UXC-A897-A1475
X
>3U5F-61143-61760
X
>2UUB-A897-A1475
X
>3OHC-A897-A1475
X
>3R8O-A923-A1501
X
>2J00-A897-A1475
X
>3KNI-A1434-A1498
X
</seq>
<hsp>
0 1:0.34576637602
0 2:0.00363391465452
0 3:0.376265998559
0 4:0.260306761742
0 5:0.356511123125
0 6:0.253329622883
0 7:0.420755794172
0 8:0.230309993324
0 9:1.0
1 2:0.344786523877
1 3:0.0714600455578
1 4:0.161261963776
1 5:0.0567753337567
1 6:0.331177633364
1 7:0.118248774602
1 8:0.512692820401
1 9:0.869244307826
2 3:0.375348758514
2 4:0.259228371799
2 5:0.35553512932
2 6:0.251207736813
2 7:0.419504533806
2 8:0.229048236176
2 9:0.998264929003
3 4:0.170079560171
3 5:0.0554163049894
3 6:0.359603580254
3 7:0.0792331403939
3 8:0.547272597869
3 9:0.894302135026
4 5:0.169113526657
4 6:0.330389544728
4 7:0.223920626692
4 8:0.444395824778
4 9:0.969623531065
5 6:0.337357493703
5 7:0.0977748052457
5 8:0.524298845949
5 9:0.87347937441
6 7:0.356508728037
6 8:0.260154144927
6 9:0.812624065913
7 8:0.56854648977
7 9:0.85369536355
8 9:0.953425194
</hsp>