sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2J01-A1220-A758
X
>3KNI-A1226-A758
X
>2ZJR-X1186-X684
X
>3R8T-A1264-A749
X
>3OHZ-A1220-A758
X
>3OHK-A1220-A758
X
>3OHJ-A1220-A758
X
>3OH5-A1220-A758
X
>3OH7-A1220-A758
X
</seq>
<hsp>
0 1:0.950737154788
0 2:0.592504668345
0 3:0.434789246553
0 4:0.494269009343
0 5:0.496732129307
0 6:0.471049794839
0 7:0.420139557335
0 8:0.414033646351
1 2:0.735469023665
1 3:0.999994789867
1 4:0.849013533723
1 5:0.976270343777
1 6:0.909059080864
1 7:0.835609204339
1 8:0.897981659004
2 3:0.569228415439
2 4:0.38001189581
2 5:0.420776607036
2 6:0.372965474969
2 7:0.36607245643
2 8:0.385894043938
3 4:0.452906263442
3 5:0.395477862499
3 6:0.381195558719
3 7:0.514213928502
3 8:0.486097846661
4 5:0.175136287444
4 6:0.129154083976
4 7:0.184795703453
4 8:0.183830864425
5 6:0.0869493142756
5 7:0.258717391347
5 8:0.201444718284
6 7:0.22182784443
6 8:0.1898329696
7 8:0.0941586700164
</hsp>