sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CC7-0947-0948
X
>3CCU-0947-0948
X
>3CCQ-0947-0948
X
>1VQ7-0947-0948
X
>1YJW-0947-0948
X
>3I56-0947-0948
X
>3CCS-0947-0948
X
>3CC4-0947-0948
X
</seq>
<hsp>
0 1:0.662486554335
0 2:0.542866836253
0 3:0.677528215097
0 4:0.664718904171
0 5:0.491814977048
0 6:0.999994480521
0 7:0.773641635465
1 2:0.162320901193
1 3:0.313879741037
1 4:0.29052961036
1 5:0.638712247043
1 6:0.488661287028
1 7:0.282217561485
2 3:0.355140565332
2 4:0.33934862888
2 5:0.544221578668
2 6:0.506519376602
2 7:0.36613407983
3 4:0.266136542116
3 5:0.724063091527
3 6:0.614516401957
3 7:0.367948156722
4 5:0.549718703108
4 6:0.582526305655
4 7:0.188979609594
5 6:0.827096730189
5 7:0.619939666009
6 7:0.493780956056
</hsp>