sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNK-A321-A342
X
>3KNI-A321-A342
X
>3U5D-1656-1699
X
>3IQR-A55-A89
X
>3IQN-A55-A89
X
>3GX6-A55-A89
X
>3IQP-A55-A89
X
</seq>
<hsp>
0 1:0.0538546773989
0 2:0.908853079581
0 3:0.965360288359
0 4:0.970340371199
0 5:0.92904214757
0 6:0.983150028925
1 2:0.923433034224
1 3:0.981360047972
1 4:0.986255703431
1 5:0.944118834725
1 6:0.999999768524
2 3:0.1269959979
2 4:0.126316747403
2 5:0.106537101453
2 6:0.131092041911
3 4:0.0117773045084
3 5:0.0455971856614
3 6:0.0400902355544
4 5:0.0472468694705
4 6:0.0369738454556
5 6:0.0683696585334
</hsp>