sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5D-11180-11189
X
>1Y39-C17-C45
X
>1Q81-A1732-A1965
X
>3CD6-01732-01965
X
>1VQN-01732-01965
X
>1VQM-01732-01965
X
>3CCM-01732-01965
X
</seq>
<hsp>
0 1:0.747906725372
0 2:0.965462541328
0 3:0.97266250653
0 4:0.986872863591
0 5:0.990532280629
0 6:1.0
1 2:0.274893682455
1 3:0.280228411654
1 4:0.294501870155
1 5:0.29690665403
1 6:0.305516773585
2 3:0.0251064886725
2 4:0.038045253664
2 5:0.038737982438
2 6:0.0422469715747
3 4:0.0182376594457
3 5:0.0210340141406
3 6:0.0291759627066
4 5:0.00607815549185
4 6:0.0184089239121
5 6:0.0134817704569
</hsp>