sequences=16
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1YHQ-02405-02349
X
>1YJN-02405-02349
X
>1YJW-02405-02349
X
>1Q81-A2405-A2349
X
>2OTJ-02405-02349
X
>3CPW-02405-02349
X
>3G71-02405-02349
X
>3G6E-02405-02349
X
>3CCE-02405-02349
X
>3CCQ-02405-02349
X
>3CCR-02405-02349
X
>3CCV-02405-02349
X
>3CCL-02405-02349
X
>3CC4-02405-02349
X
>3CMA-02405-02349
X
>3CD6-02405-02349
X
</seq>
<hsp>
0 1:0.434128125234
0 2:0.372365705328
0 3:0.277974477307
0 4:0.355094138492
0 5:0.316700339524
0 6:0.125695950012
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0 15:0.414529810989
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1 11:0.517324452402
1 12:0.670561458489
1 13:0.54400328311
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1 15:0.529585728333
2 3:0.344862869647
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4 5:0.219797009552
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9 10:0.852741315583
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10 14:1.0
10 15:0.426018749958
11 12:0.40868952407
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12 13:0.132537250527
12 14:0.503436560215
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13 14:0.48554383504
13 15:0.219086770862
14 15:0.654352724599
</hsp>