sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5H-5704-5658
X
>3U5F-61041-6951
X
>3U5D-11254-12188
X
>3U5B-21029-2939
X
>3R8S-A2685-A2841
X
>1YJW-02715-01747
X
>3OI1-B100-A872
X
</seq>
<hsp>
0 1:0.464998383899
0 2:1.0
0 3:0.443911946731
0 4:0.629919829133
0 5:0.694810352486
0 6:0.675049398776
1 2:0.551279666793
1 3:0.149535944628
1 4:0.383345831242
1 5:0.472738790896
1 6:0.404782234356
2 3:0.62399790305
2 4:0.665612407968
2 5:0.70285413402
2 6:0.642498356441
3 4:0.382307678829
3 5:0.49918858484
3 6:0.404378328059
4 5:0.530980594792
4 6:0.493784676953
5 6:0.163975053363
</hsp>