sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8O-A604-A630
X
>3R8N-A1335-A1333
X
>3R8O-A1335-A1333
X
>3KNI-A838-A815
X
>3R8T-A829-A806
X
>3R8S-A829-A806
X
>3OI1-A838-A815
X
>3OHZ-A838-A815
X
>3OH5-A838-A815
X
>3OHJ-A838-A815
X
>3OH7-A838-A815
X
>2ZJR-X764-X741
X
</seq>
<hsp>
0 1:1.0
0 2:0.962640683699
0 3:0.867576266024
0 4:0.93278402057
0 5:0.997332496296
0 6:0.782283862799
0 7:0.760914620652
0 8:0.755480931012
0 9:0.797623620162
0 10:0.761265878327
0 11:0.804865388074
1 2:0.344350110544
1 3:0.756968106442
1 4:0.753138570578
1 5:0.886383581291
1 6:0.741218688917
1 7:0.74435486286
1 8:0.747793981834
1 9:0.722226078212
1 10:0.752492732165
1 11:0.563963158568
2 3:0.725205530437
2 4:0.70551104751
2 5:0.822434515616
2 6:0.698654385788
2 7:0.704041947335
2 8:0.684092792912
2 9:0.651363504238
2 10:0.690294893828
2 11:0.552452282039
3 4:0.126142221319
3 5:0.227903365359
3 6:0.138054345387
3 7:0.135118641263
3 8:0.178168358527
3 9:0.137527701488
3 10:0.179138935019
3 11:0.222402760649
4 5:0.16863281945
4 6:0.181621831256
4 7:0.197325583002
4 8:0.244441663307
4 9:0.179328921721
4 10:0.243124375061
4 11:0.278565457414
5 6:0.266242900649
5 7:0.285208436444
5 8:0.299173918435
5 9:0.27669141799
5 10:0.292909579374
5 11:0.414705967854
6 7:0.0412935217394
6 8:0.121732612172
6 9:0.102176343927
6 10:0.117980564931
6 11:0.246408925861
7 8:0.122849292985
7 9:0.0990640437398
7 10:0.123076327775
7 11:0.237834960807
8 9:0.116978701992
8 10:0.0231029869296
8 11:0.243585462408
9 10:0.121911129024
9 11:0.21491652954
10 11:0.250699957271
</hsp>