sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2ZJR-X2390-X1805
X
>3OH7-A2433-A1856
X
>3OH5-A2433-A1856
X
>3OHK-A2433-A1856
X
>3OHJ-A2433-A1856
X
>3R8T-A2595-A1932
X
>3OI1-A2433-A1856
X
>3R8S-A2596-A1933
X
>3OHZ-A2433-A1856
X
>2J03-A2480-A1856
X
>2J01-A2480-A1856
X
</seq>
<hsp>
0 1:0.871842209711
0 2:0.860653218072
0 3:0.877701415364
0 4:0.8985439823
0 5:0.72462911509
0 6:0.999989457883
0 7:0.697985296442
0 8:0.987274550461
0 9:0.894508380864
0 10:0.911983275355
1 2:0.0523390820131
1 3:0.0990625106219
1 4:0.129139517597
1 5:0.270734327997
1 6:0.226064861224
1 7:0.382313123581
1 8:0.233659587097
1 9:0.229154889822
1 10:0.26105729307
2 3:0.126618649438
2 4:0.148481470541
2 5:0.25431057278
2 6:0.207843920163
2 7:0.357381535744
2 8:0.211563747563
2 9:0.224849261436
2 10:0.254667432473
3 4:0.0525239038294
3 5:0.25735642939
3 6:0.272989660118
3 7:0.399227970096
3 8:0.288085695682
3 9:0.234781767042
3 10:0.263621178744
4 5:0.258177677706
4 6:0.272828554056
4 7:0.400487120082
4 8:0.289837955622
4 9:0.228974368403
4 10:0.250837290825
5 6:0.358314600699
5 7:0.263567850562
5 8:0.359204992013
5 9:0.229024250225
5 10:0.245747588929
6 7:0.402596801595
6 8:0.054596567956
6 9:0.261192749432
6 10:0.267818500879
7 8:0.391176811606
7 9:0.373845189852
7 10:0.377864817083
8 9:0.255301365651
8 10:0.260278936947
9 10:0.0500608690077
</hsp>