sequences=10
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHJ-A2359-A2303
X
>3OHK-A2359-A2303
X
>3R8T-A2521-A2465
X
>3OH7-A2359-A2303
X
>3OHZ-A2359-A2303
X
>3OI1-A2359-A2303
X
>3KNI-A2434-A2378
X
>3R8S-A2522-A2466
X
>3F1H-A2513-A2457
X
>3F1F-A2513-A2457
X
</seq>
<hsp>
0 1:0.022926301653
0 2:0.589173161442
0 3:0.114163560799
0 4:0.386191110521
0 5:0.36718841293
0 6:0.725496152588
0 7:0.769821130704
0 8:0.365387919664
0 9:0.367369596805
1 2:0.579359425341
1 3:0.1163249658
1 4:0.392117390623
1 5:0.372357985757
1 6:0.722276061799
1 7:0.762411819396
1 8:0.361514209937
1 9:0.363089101487
2 3:0.549791873014
2 4:0.750727486864
2 5:0.726616656933
2 6:0.553053499477
2 7:0.628924404262
2 8:0.371901561545
2 9:0.370916781594
3 4:0.396270503952
3 5:0.375247957762
3 6:0.677045428882
3 7:0.794564933638
3 8:0.277879128332
3 9:0.280294155886
4 5:0.0290553247046
4 6:0.601576789005
4 7:0.939904335735
4 8:0.58455197906
4 9:0.586449788284
5 6:0.590142852722
5 7:0.919389984044
5 8:0.561773954524
5 9:0.563526672959
6 7:0.999997614428
6 8:0.591587695559
6 9:0.592542984563
7 8:0.796771046955
7 9:0.79807667555
8 9:0.0123837414494
</hsp>