sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5F-6627-61098
X
>3KNI-A552-A537
X
>3OH5-A552-A537
X
>3OH7-A552-A537
X
>3OHZ-A552-A537
X
>3OI1-A552-A537
X
>2J03-A552-A537
X
>2J01-A552-A537
X
</seq>
<hsp>
0 1:0.685601374938
0 2:0.94713736005
0 3:0.957197837777
0 4:0.99999412073
0 5:0.998416224006
0 6:0.97238093503
0 7:0.980222727073
1 2:0.516374952919
1 3:0.542048405569
1 4:0.617763754737
1 5:0.596057764526
1 6:0.550924492661
1 7:0.560599941094
2 3:0.0871316678174
2 4:0.187459914844
2 5:0.198012530011
2 6:0.45463916327
2 7:0.481317163927
3 4:0.177769588525
3 5:0.188871796548
3 6:0.500651380598
3 7:0.526562911857
4 5:0.085500293903
4 6:0.443230704654
4 7:0.467349250372
5 6:0.44536826679
5 7:0.467162700872
6 7:0.0359079347131
</hsp>