sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5F-6791-6110
X
>3U5D-1878-134
X
>3U5H-5884-534
X
>3R8S-A1129-A2032
X
>3F1H-A201-A169
X
>3F1F-A201-A169
X
</seq>
<hsp>
0 1:0.478464907989
0 2:0.506301101252
0 3:0.442850276635
0 4:0.987684359298
0 5:1.0
1 2:0.0695885083408
1 3:0.53894731538
1 4:0.718454469683
1 5:0.730816289689
2 3:0.580213552823
2 4:0.696938505647
2 5:0.709652523253
3 4:0.869309246682
3 5:0.877324263269
4 5:0.0187262366371
</hsp>