sequences=16
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2QA4-01246-01245
X
>1GTS-B57-B56
X
>3F1E-A798-A797
X
>3F1G-A798-A797
X
>1QTQ-B57-B56
X
>3R8N-A818-A817
X
>2FMT-D60-D59
X
>1H4S-T57-T56
X
>1GTR-B57-B56
X
>3OHD-A798-A797
X
>1H4Q-T57-T56
X
>1J1U-B60-B59
X
>3OHC-A798-A797
X
>2J02-V60-V59
X
>3OGY-A798-A797
X
>1FJG-A798-A797
X
</seq>
<hsp>
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0 2:0.965415287936
0 3:0.964736224215
0 4:0.0788954676103
0 5:0.91189945733
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12 14:0.0226430222914
12 15:0.053383601417
13 14:0.872586744447
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14 15:0.0451664464873
</hsp>