sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8T-A119-A118
X
>3F1H-A112-A111
X
>3OHK-A112-A111
X
>3F1F-A112-A111
X
>3KNK-A112-A111
X
>3OHJ-A112-A111
X
>3OI1-A112-A111
X
>3OH7-A112-A111
X
</seq>
<hsp>
0 1:0.751636567824
0 2:0.614256132617
0 3:0.743802193146
0 4:1.0
0 5:0.591142708743
0 6:0.626213700597
0 7:0.59130934184
1 2:0.414862246607
1 3:0.0322889584503
1 4:0.734789662725
1 5:0.474379660529
1 6:0.397806520105
1 7:0.563405939998
2 3:0.405779335197
2 4:0.723789737082
2 5:0.103193164259
2 6:0.231062159407
2 7:0.301682702936
3 4:0.746178233265
3 5:0.467258086023
3 6:0.386276092142
3 7:0.554938293048
4 5:0.722768868347
4 6:0.789469834075
4 7:0.77036951719
5 6:0.254582712485
5 7:0.248834214932
6 7:0.234092272483
</hsp>