sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2ZJR-X1680-X1679
X
>2ANN-B6-B5
X
>2ANR-B8-B7
X
>2HVY-E34-E33
X
>3CCE-01863-01862
X
>3CCL-01863-01862
X
>2QA4-01862-01861
X
</seq>
<hsp>
0 1:0.947081548014
0 2:0.939545068715
0 3:0.936594262578
0 4:0.944970953121
0 5:0.94055215831
0 6:1.0
1 2:0.013220737381
1 3:0.0321881143149
1 4:0.0785869884368
1 5:0.0855345688148
1 6:0.0787818841158
2 3:0.0294062041056
2 4:0.0793913332456
2 5:0.0860478026052
2 6:0.0824606651274
3 4:0.0633997382253
3 5:0.0647695229846
3 6:0.0841458301541
4 5:0.0233329145541
4 6:0.0870368691967
5 6:0.100281355423
</hsp>