sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5B-2251-2250
X
>3R8S-A430-A429
X
>3U5H-5407-5406
X
>1Q96-A11-A10
X
>3R8S-A1433-A1432
X
>3CUL-C45-C44
X
>3U5F-6248-6247
X
</seq>
<hsp>
0 1:0.892108451174
0 2:0.390017821294
0 3:0.134459595389
0 4:0.125060272208
0 5:0.202660151193
0 6:0.0809164711379
1 2:0.578289339632
1 3:0.999999651078
1 4:0.89409388022
1 5:0.746754087684
1 6:0.899506179663
2 3:0.499525751791
2 4:0.379695945025
2 5:0.287339483608
2 6:0.39154295758
3 4:0.169090947758
3 5:0.280785731376
3 6:0.123624966024
4 5:0.164095766813
4 6:0.141461484793
5 6:0.207073856281
</hsp>