sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8S-A826-A2423
X
>3OHZ-A835-A2260
X
>3OHJ-A835-A2260
X
>3OHK-A835-A2260
X
>3OH5-A835-A2260
X
>3OH7-A835-A2260
X
</seq>
<hsp>
0 1:0.978117355973
0 2:1.0
0 3:0.995932198034
0 4:0.989462602866
0 5:0.991181920591
1 2:0.0893537868344
1 3:0.0946705756253
1 4:0.0969058496185
1 5:0.102457713948
2 3:0.0193963591794
2 4:0.0799920455826
2 5:0.0850395392731
3 4:0.0732218185361
3 5:0.076582085663
4 5:0.0135025342346
</hsp>