sequences=10
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1FFK-01086-01085
X
>3OHJ-A524-A523
X
>3OHK-A524-A523
X
>3OH7-A524-A523
X
>3OH5-A524-A523
X
>3R8S-A510-A509
X
>3OI1-A524-A523
X
>3OHZ-A524-A523
X
>2J01-A524-A523
X
>2J03-A524-A523
X
</seq>
<hsp>
0 1:0.901807915981
0 2:0.915424393781
0 3:0.991018240507
0 4:0.950044399698
0 5:0.735072874187
0 6:0.883273153228
0 7:0.878363100307
0 8:0.984396039166
0 9:0.999998434097
1 2:0.0940067004595
1 3:0.429487638633
1 4:0.390504701494
1 5:0.664141955077
1 6:0.40054297263
1 7:0.358860316065
1 8:0.742425945076
1 9:0.748153662082
2 3:0.396444077633
2 4:0.377693071747
2 5:0.649964465216
2 6:0.359902596402
2 7:0.325851892086
2 8:0.716251369428
2 9:0.722363565023
3 4:0.108174269439
3 5:0.472015033535
3 6:0.266609867812
3 7:0.270508891553
3 8:0.441695554249
3 9:0.437791630711
4 5:0.457422836667
4 6:0.281783844016
4 7:0.261156620541
4 8:0.45167495057
4 9:0.448679473706
5 6:0.366312863532
5 7:0.391576259662
5 8:0.32138586316
5 9:0.355871410642
6 7:0.0967618139486
6 8:0.456219951616
6 9:0.478810250692
7 8:0.479025487851
7 9:0.499594736785
8 9:0.0560733506805
</hsp>