sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8T-A510-A509
X
>3OH7-A1612-A1611
X
>3OH5-A1612-A1611
X
>3F1F-A1690-A1689
X
>3F1H-A1690-A1689
X
>3KNK-A1611-A1610
X
>2J03-A1612-A1611
X
>2J01-A1612-A1611
X
</seq>
<hsp>
0 1:0.83953847918
0 2:0.819738016042
0 3:0.86781809983
0 4:0.884949409537
0 5:0.525913614711
0 6:0.988950094272
0 7:1.0
1 2:0.115330505601
1 3:0.313580310725
1 4:0.295113017317
1 5:0.780224855284
1 6:0.500626797227
1 7:0.511780024584
2 3:0.287158604065
2 4:0.2655640546
2 5:0.78996507046
2 6:0.52612895073
2 7:0.538389575937
3 4:0.0559994523217
3 5:0.741737516269
3 6:0.346257524574
3 7:0.362136771101
4 5:0.766823871154
4 6:0.372196093942
4 7:0.3893619898
5 6:0.685345973524
5 7:0.695342484094
6 7:0.0411284341621
</hsp>