sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OWW-B65-B64
X
>3OWI-B66-B65
X
>3OXE-B66-B65
X
>3OWW-A66-A65
X
>3U5F-61374-61373
X
>3D2S-G3-G2
X
>3D2S-E3-E2
X
>2QA4-02543-02542
X
</seq>
<hsp>
0 1:0.05425863082
0 2:0.075980661262
0 3:0.059931886846
0 4:0.976641767223
0 5:0.948737426012
0 6:0.912090819332
0 7:0.596666888688
1 2:0.0553180306091
1 3:0.0672983173994
1 4:0.977370742058
1 5:0.947519931328
1 6:0.912037653824
1 7:0.567976632815
2 3:0.0569227920568
2 4:0.965036813586
2 5:0.940428728348
2 6:0.905611905116
2 7:0.547118032748
3 4:0.999997654174
3 5:0.97348985064
3 6:0.937017751242
3 7:0.585165546042
4 5:0.267282281316
4 6:0.258546484232
4 7:0.866588373622
5 6:0.0701542265459
5 7:0.924821502417
6 7:0.894566992427
</hsp>