sequences=17
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3G78-A236-A233
X
>3KNI-A1871-A1870
X
>1SDS-D6-D5
X
>3OHJ-A1872-A1871
X
>3OHK-A1872-A1871
X
>1SDS-F6-F5
X
>1FJG-A1063-A1062
X
>1SDS-E6-E5
X
>3OHZ-A1872-A1871
X
>3OI1-A1872-A1871
X
>3OH5-A1872-A1871
X
>3OH7-A1872-A1871
X
>2J03-A1872-A1871
X
>2J01-A1872-A1871
X
>3R8T-A1948-A1947
X
>3R8S-A1949-A1948
X
>1XMQ-A1502-A1501
X
</seq>
<hsp>
0 1:0.549806897726
0 2:0.710079562902
0 3:0.547873424639
0 4:0.547507633387
0 5:0.707794379652
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0 16:1.0
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14 16:0.739846769013
15 16:0.716544143233
</hsp>