sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3PEY-B1-B0
X
>3LA5-A36-A35
X
>3GOG-A33-A32
X
>3OXE-B19-B18
X
>3PU4-R27-R26
X
>3OWW-B19-B18
X
>3OXB-B19-B18
X
>3OWI-B19-B18
X
>2DR9-B18-B17
X
</seq>
<hsp>
0 1:0.897589482781
0 2:0.815974846255
0 3:0.822397277286
0 4:0.4357032633
0 5:0.784739039554
0 6:0.899133356522
0 7:0.825948077335
0 8:0.174985061151
1 2:0.115825778601
1 3:0.129443752167
1 4:1.0
1 5:0.161919551953
1 6:0.372270437527
1 7:0.121512954016
1 8:0.855134047803
2 3:0.0787829216221
2 4:0.938175592037
2 5:0.115431426735
2 6:0.377233969728
2 7:0.0867153419042
2 8:0.782764503861
3 4:0.954253084995
3 5:0.0924513935372
3 6:0.343059494102
3 7:0.0441730631669
3 8:0.785655203278
4 5:0.892545211217
4 6:0.998068504725
4 7:0.945906413421
4 8:0.431477466097
5 6:0.379229823817
5 7:0.0624759041922
5 8:0.743393169201
6 7:0.354353615932
6 8:0.853595849002
7 8:0.785409583487
</hsp>