sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3L0U-A59-A58
X
>2TRA-A58-A57
X
>3U5H-5116-5115
X
>2J02-W59-W58
X
>1ASZ-S58-S57
X
>1ASY-S58-S57
X
</seq>
<hsp>
0 1:0.532348764627
0 2:0.618590299075
0 3:0.504107585186
0 4:0.743313619167
0 5:0.71350050057
1 2:0.861544508965
1 3:0.611882355227
1 4:0.999999381343
1 5:0.935472659887
2 3:0.748171412607
2 4:0.723133700313
2 5:0.823541720072
3 4:0.539641021019
3 5:0.394295651339
4 5:0.242916132919
</hsp>