ClaRNA

Doublet Group info: classifier/base-phosphate/W_5BPh/UG/sub-001

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: base-phosphate
Desc: W_5BPh/UG/sub-001
Members:
count: 73
download members
1N8R:A1707:A1710
3CCL:01707:01710
3U5D:337:340
1YJN:01938:01941
1FFK:01891:01894
3CD6:01707:01710
2ZJR:X1816:X1819
1K8A:A1707:A1710
3OH7:A722:A725
3OH5:A722:A725
1VQ7:01938:01941
1VQO:01707:01710
2QEX:01707:01710
1QVG:01707:01710
3F1F:A1945:A1948
1YJW:01707:01710
1VQ7:01707:01710
1YIJ:01707:01710
3U5D:11545:11548
1YI2:01938:01941
3I56:01707:01710
1KD1:A1707:A1710
1VQ4:01707:01710
3CXC:01707:01710
1VQL:01707:01710
2OTL:01707:01710
1NJI:A1707:A1710
3CPW:01938:01941
1VQ5:01707:01710
1VQ6:01707:01710
1M90:A1938:A1941
3OHJ:A1612:A1615
3CCV:01707:01710
1VQN:01707:01710
1QVG:01938:01941
1S72:01938:01941
1JJ2:01707:01710
1M90:A1707:A1710
1S72:01707:01710
1Q82:A1938:A1941
1K8A:A1938:A1941
3CC2:01707:01710
1YJW:01938:01941
1YIT:01938:01941
3CC2:01938:01941
1Q86:A1938:A1941
3CC7:01938:01941
3CCL:01938:01941
3CCE:01938:01941
1VQ9:01707:01710
3OHK:A1867:A1870
2QEX:01938:01941
1VQP:01938:01941
3CCU:01938:01941
3G6E:01938:01941
3CCQ:01938:01941
3CME:01938:01941
3CMA:01938:01941
1VQK:01938:01941
3CC4:01938:01941
3CCS:01938:01941
1VQM:01938:01941
1VQN:01938:01941
3OH7:A1867:A1870
3CD6:01938:01941
3CCM:01938:01941
1VQ7:02728:02706
1VQ6:02728:02706
1NJI:A2728:A2706
1S72:02728:02706
1YHQ:02728:02706
1VQL:02728:02706
1VQK:02728:02706
Closest classifer groups: show all      show selected
Group Members RMSD
bp/HS_cis 1 0.232
base-phosphate/W_5BPh 21 0.251
base-phosphate/H_9BPh 1 0.299
base-ribose/H_9BR 2 0.355
base-ribose/W_6BR 2 0.361
stacking/<< 3 0.415
stacking/<> 5 0.573
stacking/>> 2 0.596
base-phosphate/W_4BPh 4 0.621
base-ribose/H_0BR 8 0.624

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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