sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1YJ9-0498-010
X
>2QEX-0498-010
X
>1VQ8-0498-010
X
>1VQP-0498-010
X
>1VQK-0498-010
X
>1VQN-0498-010
X
>1VQM-0498-010
X
>2VQF-A1068-A1071
X
>2VQE-A1068-A1071
X
</seq>
<hsp>
0 1:0.134176998859
0 2:0.111730009772
0 3:0.11539247682
0 4:0.131296841808
0 5:0.126482105953
0 6:0.134215831662
0 7:0.980297730093
0 8:1.0
1 2:0.0678225814832
1 3:0.0633868374996
1 4:0.0616322775162
1 5:0.0859399412857
1 6:0.0656749954835
1 7:0.88533226491
1 8:0.905034811823
2 3:0.0346026835692
2 4:0.0435299675206
2 5:0.0714298713681
2 6:0.0687349960556
2 7:0.915544202133
2 8:0.937133396527
3 4:0.0282113056572
3 5:0.0488037346859
3 6:0.0394412878543
3 7:0.918786111665
3 8:0.938580208842
4 5:0.0410618013535
4 6:0.045701442601
4 7:0.912942614705
4 8:0.933190570427
5 6:0.044616444935
5 7:0.926951961525
5 8:0.94548937335
6 7:0.903822897031
6 8:0.921676432339
7 8:0.0615337178094
</hsp>