sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1VQ8-0822-02485
X
>3CCM-0822-02485
X
>3CPW-0822-02485
X
>3CD6-0822-02485
X
>1VQK-0822-02485
X
>1VQP-0822-02485
X
>3CMA-0822-02485
X
>1VQ9-0822-02485
X
>3CME-0822-02485
X
>1Q81-A822-A2485
X
>1VQO-0822-02485
X
>1Q81-A1193-A2012
X
</seq>
<hsp>
0 1:0.212101019469
0 2:0.251826797539
0 3:0.145210931563
0 4:0.105082202566
0 5:0.114630775682
0 6:0.219801857698
0 7:0.0687958323657
0 8:0.276886517679
0 9:0.293051170508
0 10:0.0857654876341
0 11:0.841691506915
1 2:0.441597844887
1 3:0.279784309403
1 4:0.152847240543
1 5:0.209610006436
1 6:0.415686206902
1 7:0.213857456258
1 8:0.475954906357
1 9:0.490520508625
1 10:0.270488008068
1 11:1.0
2 3:0.181688982689
2 4:0.343098712719
2 5:0.335626660906
2 6:0.0506592133222
2 7:0.290289844193
2 8:0.0765233193166
2 9:0.10689720644
2 10:0.228213567327
2 11:0.674893686928
3 4:0.224307447964
3 5:0.239058859632
3 6:0.163798622835
3 7:0.200067638214
3 8:0.229079106211
3 9:0.246270634997
3 10:0.166897320968
3 11:0.790331005113
4 5:0.0795886511053
4 6:0.313615095289
4 7:0.0768215320415
4 8:0.364420423507
4 9:0.376179207837
4 10:0.135549499624
4 11:0.909442400679
5 6:0.301607922175
5 7:0.05896261408
5 8:0.341264202912
5 9:0.354816098787
5 10:0.113369241236
5 11:0.877428876375
6 7:0.259129866827
6 8:0.0805785346055
6 9:0.098272626474
6 10:0.197223374519
6 11:0.705314629131
7 8:0.302596355322
7 9:0.320340805166
7 10:0.0798674532908
7 11:0.847893124157
8 9:0.0767244930731
8 10:0.237261988271
8 11:0.645952872721
9 10:0.249728212928
9 11:0.691513445968
10 11:0.801658018465
</hsp>