sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCV-0822-02485
X
>3G6E-0822-02485
X
>3CCQ-0822-02485
X
>3CC7-0822-02485
X
>3CCL-0822-02485
X
>1YIT-0822-02485
X
>3CCJ-0822-02485
X
>3CCU-0822-02485
X
>2OTL-0822-02485
X
>3CXC-0822-02485
X
>1Q86-A822-A2485
X
</seq>
<hsp>
0 1:0.331249741671
0 2:0.405172541715
0 3:0.336297638795
0 4:0.349534978626
0 5:1.0
0 6:0.333345601725
0 7:0.394189120427
0 8:0.348877828586
0 9:0.324269105241
0 10:0.369653455163
1 2:0.143122717308
1 3:0.0994609998914
1 4:0.14766659165
1 5:0.811837140477
1 6:0.236168070271
1 7:0.131110203379
1 8:0.106691075122
1 9:0.165531165256
1 10:0.158644967182
2 3:0.100313377316
2 4:0.0889410056115
2 5:0.872123156995
2 6:0.187989112088
2 7:0.141632630536
2 8:0.12540013175
2 9:0.181728448288
2 10:0.131935905845
3 4:0.0892814847334
3 5:0.867731199746
3 6:0.208071081787
3 7:0.12631966798
3 8:0.106032699744
3 9:0.158294070255
3 10:0.140721068057
4 5:0.883038174007
4 6:0.13485128668
4 7:0.129902729232
4 8:0.0925086865677
4 9:0.116676060619
4 10:0.0809321368625
5 6:0.9468216501
5 7:0.827109837748
5 8:0.839170230014
5 9:0.860807243519
5 10:0.860870439417
6 7:0.218839822441
6 8:0.171421003196
6 9:0.143435843654
6 10:0.135015264839
7 8:0.061002570285
7 9:0.118622060353
7 10:0.100611675698
8 9:0.0797979707227
8 10:0.065729168924
9 10:0.0687681826428
</hsp>