sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5D-11135-12857
X
>3U5H-51141-52858
X
>3F1E-A1478-A1494
X
>2J02-A1478-A1494
X
>3F1G-A1478-A1494
X
>3KNK-A1451-A1518
X
>2J03-A1446-A1519
X
>2J01-A1446-A1519
X
</seq>
<hsp>
0 1:0.0457741481339
0 2:0.689461397879
0 3:0.680822721022
0 4:0.68742378159
0 5:0.493566188518
0 6:0.606466853692
0 7:0.605347988574
1 2:0.676519634229
1 3:0.668320028048
1 4:0.674379277246
1 5:0.505598732987
1 6:0.616373430991
1 7:0.614944313282
2 3:0.0455161840976
2 4:0.00705301749827
2 5:0.939470617756
2 6:0.98381247514
2 7:0.98865528694
3 4:0.0477451204489
3 5:0.933469228138
3 6:0.995862303465
3 7:1.0
4 5:0.938437504983
4 6:0.985603180594
4 7:0.990442845955
5 6:0.141823007246
5 7:0.139883674514
6 7:0.00776893828573
</hsp>