sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2UXC-A832-A844
X
>3OI0-A832-A844
X
>3OHY-A832-A844
X
>2ZJR-X1560-X1216
X
>3OHC-A832-A844
X
>3OHD-A832-A844
X
>3F1E-A832-A844
X
>3R8T-A1634-A1294
X
>1YJ9-0443-0448
X
>1GID-B20-B95
X
>3F1G-A1275-A1215
X
>3F1E-A1275-A1215
X
</seq>
<hsp>
0 1:0.270972710534
0 2:0.262619789893
0 3:0.314160839792
0 4:0.402444342251
0 5:0.40056881408
0 6:0.295861156236
0 7:0.388126622962
0 8:0.749025919562
0 9:0.728367931415
0 10:0.967146426324
0 11:0.972342245954
1 2:0.0310036209951
1 3:0.23188685567
1 4:0.307013856813
1 5:0.301077012293
1 6:0.418787419207
1 7:0.374371420474
1 8:0.649420502016
1 9:0.700228797272
1 10:0.876528564764
1 11:0.88151915691
2 3:0.231045860278
2 4:0.291374031567
2 5:0.286199969096
2 6:0.405338519881
2 7:0.36612338612
2 8:0.649471196361
2 9:0.697771359262
2 10:0.866153753863
2 11:0.871399724808
3 4:0.356545566805
3 5:0.35233176473
3 6:0.515376863955
3 7:0.30017839094
3 8:0.506586760763
3 9:0.515493741496
3 10:0.822355185106
3 11:0.823738770382
4 5:0.0171691529528
4 6:0.462910716351
4 7:0.321257129753
4 8:0.590367321696
4 9:0.6567240698
4 10:0.748448528537
4 11:0.751249442207
5 6:0.461142773917
5 7:0.320913077204
5 8:0.588883713142
5 9:0.655610742983
5 10:0.74690803859
5 11:0.749786219062
6 7:0.454929855281
6 8:0.864064059004
6 9:0.896085540488
6 10:0.991276925248
6 11:0.99999548319
7 8:0.441348995097
7 9:0.587988704878
7 10:0.859341487832
7 11:0.859546410893
8 9:0.443835845333
8 10:0.82110711928
8 11:0.814024836761
9 10:0.642336225052
9 11:0.633592992251
10 11:0.0213488601822
</hsp>