sequences=16
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1YIT-0482-0486
X
>3G71-0482-0486
X
>3CXC-0482-0486
X
>1QVG-0482-0486
X
>2OTL-0482-0486
X
>3CCR-0482-0486
X
>2PXK-B17-B34
X
>1VQ7-0482-0486
X
>1VQ5-0482-0486
X
>1YJ9-0482-0486
X
>2PXD-B17-B34
X
>3CCQ-0482-0486
X
>2PXU-B17-B34
X
>1KD5-B3-A6
X
>1KD3-B3-A6
X
>1KD3-A3-B6
X
</seq>
<hsp>
0 1:0.0719432419037
0 2:0.108270264658
0 3:0.0675715582544
0 4:0.107810723913
0 5:0.313586413928
0 6:0.438028764872
0 7:0.17097517823
0 8:0.279797474494
0 9:0.105924516871
0 10:0.409055393455
0 11:0.122581166548
0 12:0.379120287068
0 13:0.756470392292
0 14:0.590864316071
0 15:0.584227500949
1 2:0.122283542788
1 3:0.0783627248445
1 4:0.132652145039
1 5:0.27288745656
1 6:0.460286065669
1 7:0.208411117973
1 8:0.318914974843
1 9:0.13535820246
1 10:0.437164238675
1 11:0.147956148218
1 12:0.40586902778
1 13:0.800118558111
1 14:0.630666824865
1 15:0.624574809833
2 3:0.0656882061321
2 4:0.0581735841055
2 5:0.34322708533
2 6:0.476917230564
2 7:0.142313439506
2 8:0.271556196948
2 9:0.110679266811
2 10:0.450080180335
2 11:0.068113013337
2 12:0.380615028706
2 13:0.751236745658
2 14:0.590013670906
2 15:0.580454347314
3 4:0.0694031191458
3 5:0.314509440604
3 6:0.452068325607
3 7:0.147923369147
3 8:0.272152160842
3 9:0.089809313289
3 10:0.420802624143
3 11:0.089380322541
3 12:0.371197816777
3 13:0.753422929471
3 14:0.586242829032
3 15:0.577646740149
4 5:0.353810650447
4 6:0.43532351621
4 7:0.136622019994
4 8:0.268085874836
4 9:0.124157559768
4 10:0.413230451762
4 11:0.0766380025425
4 12:0.343111274149
4 13:0.723436797978
4 14:0.557169285177
4 15:0.549465603154
5 6:0.63558949521
5 7:0.452673169257
5 8:0.56653799233
5 9:0.359190754716
5 10:0.613015187874
5 11:0.388568890487
5 12:0.606207342769
5 13:1.0
5 14:0.795195274606
5 15:0.793979948714
6 7:0.422234444073
6 8:0.434018686664
6 9:0.467866679614
6 10:0.141972908785
6 11:0.452838277321
6 12:0.219255429008
6 13:0.556329685036
6 14:0.404430660237
6 15:0.417572211653
7 8:0.134745889
7 9:0.110887989858
7 10:0.371328796583
7 11:0.0897710031914
7 12:0.293792881991
7 13:0.62962527362
7 14:0.490393428005
7 15:0.47612773109
8 9:0.212656559465
8 10:0.362998238302
8 11:0.213457483227
8 12:0.293390311724
8 13:0.549301389579
8 14:0.45264868708
8 15:0.432912787359
9 10:0.413506389254
9 11:0.0863293039508
9 12:0.362587876108
9 13:0.709377447399
9 14:0.553713431122
9 15:0.541803926862
10 11:0.418150630645
10 12:0.177119807074
10 13:0.489615627423
10 14:0.324937115965
10 15:0.331442593504
11 12:0.339711593022
11 13:0.698765985571
11 14:0.547601954803
11 15:0.536802207832
12 13:0.441428954075
12 14:0.278918175781
12 15:0.280037586035
13 14:0.244202983085
13 15:0.235399485327
14 15:0.0387137855372
</hsp>