sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5B-2951-2629
X
>3KNK-A1776-A1805
X
>3F1F-A1855-A1884
X
>3F1H-A1855-A1884
X
>2QBZ-X137-X10
X
>3U5F-6963-6626
X
>1Z43-A64-A81
X
</seq>
<hsp>
0 1:0.716747735977
0 2:0.676504786746
0 3:0.679573181278
0 4:0.409621252405
0 5:0.309990711153
0 6:0.842611166171
1 2:0.205439817654
1 3:0.215911240722
1 4:0.601285952488
1 5:0.500929749909
1 6:1.0
2 3:0.0357644084565
2 4:0.536259647661
2 5:0.489854998625
2 6:0.981102510825
3 4:0.537998593165
3 5:0.497417976389
3 6:0.959335520539
4 5:0.313786431398
4 6:0.952304699361
5 6:0.895032660706
</hsp>