sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5D-1837-1810
X
>3U5H-5843-5816
X
>3PDR-X145-X10
X
>2R8S-R114-R153
X
>3OI1-A1777-A1806
X
>3OHZ-A1777-A1806
X
>2PXE-B17-B34
X
</seq>
<hsp>
0 1:0.316955666578
0 2:0.540266227993
0 3:0.453627165478
0 4:0.676998085759
0 5:0.739664359881
0 6:0.946037335358
1 2:0.657392999702
1 3:0.255537280788
1 4:0.825415196443
1 5:0.883031053295
1 6:1.0
2 3:0.695857849687
2 4:0.392635579399
2 5:0.443002222545
2 6:0.547416683698
3 4:0.853359703245
3 5:0.912805419926
3 6:0.958784364949
4 5:0.0939437451575
4 6:0.412425559535
5 6:0.404602447584
</hsp>