sequences=16
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8T-A239-A256
X
>2ZJR-X179-X168
X
>2J01-A184-A173
X
>2J03-A184-A173
X
>3F1F-A187-A176
X
>3F1H-A187-A176
X
>3OI1-A184-A173
X
>3OHZ-A184-A173
X
>3OH7-A184-A173
X
>3OHK-A184-A173
X
>3CCJ-0161-0150
X
>3OHJ-A184-A173
X
>3KNK-A184-A173
X
>1N8R-A161-A150
X
>1QVG-0161-0150
X
>1K9M-A161-A150
X
</seq>
<hsp>
0 1:0.885721272918
0 2:0.802696411339
0 3:0.804037531554
0 4:0.742228987411
0 5:0.743501767268
0 6:0.671983312895
0 7:0.686654055099
0 8:0.681279153649
0 9:0.738771752373
0 10:0.823581138521
0 11:0.717414884338
0 12:0.824501444354
0 13:1.0
0 14:0.933429608115
0 15:0.927429122201
1 2:0.373953529182
1 3:0.363540478291
1 4:0.397440501178
1 5:0.370890639272
1 6:0.403803910305
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1 10:0.494575686076
1 11:0.44777529124
1 12:0.440415801999
1 13:0.515877111732
1 14:0.542598326939
1 15:0.575308124783
2 3:0.028853115233
2 4:0.39581131786
2 5:0.377926880416
2 6:0.317454847968
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3 4:0.397485976194
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3 10:0.268467566349
3 11:0.229485289079
3 12:0.23411030453
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3 15:0.352595139219
4 5:0.0415784270959
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4 9:0.342739328647
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7 12:0.284310319387
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8 9:0.207753552919
8 10:0.302160182577
8 11:0.185405200913
8 12:0.246568051101
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8 15:0.500707855319
9 10:0.18837681966
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10 13:0.290409311416
10 14:0.348834715502
10 15:0.257027735846
11 12:0.162247318279
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11 15:0.355652944497
12 13:0.311381339784
12 14:0.39084961948
12 15:0.308484750481
13 14:0.187976630847
13 15:0.156900518598
14 15:0.224451282097
</hsp>