sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNK-A1714-A1698
X
>3F1F-A1793-A1777
X
>3OH5-A1715-A1699
X
>3OHK-A1715-A1699
X
>3F1H-A1793-A1777
X
>3OH7-A1715-A1699
X
>2ZJR-X1683-X1667
X
>2J03-A1715-A1699
X
>3OHJ-A1715-A1699
X
>2J01-A1715-A1699
X
>1Q81-A150-A880
X
</seq>
<hsp>
0 1:0.537606147768
0 2:0.629753806164
0 3:0.566259266325
0 4:0.506415016426
0 5:0.614584857113
0 6:0.32949791354
0 7:0.648447545276
0 8:0.57743125253
0 9:0.683371416793
0 10:0.781883102652
1 2:0.501879450013
1 3:0.568791702891
1 4:0.0987141503111
1 5:0.49153165023
1 6:0.5159459836
1 7:0.610675966597
1 8:0.52868873668
1 9:0.61671833436
1 10:0.748532377562
2 3:0.376403994876
2 4:0.512018462989
2 5:0.0810659779178
2 6:0.758462014321
2 7:0.501110819645
2 8:0.340574163291
2 9:0.521753470995
2 10:1.0
3 4:0.549231625188
3 5:0.348500731517
3 6:0.693931685672
3 7:0.293384021109
3 8:0.110645280838
3 9:0.335651357752
3 10:0.849661097979
4 5:0.496825119838
4 6:0.493973380967
4 7:0.616462425314
4 8:0.509016985531
4 9:0.628107468765
4 10:0.727094942519
5 6:0.740104203829
5 7:0.495191739222
5 8:0.325987148281
5 9:0.516807493983
5 10:0.981812231225
6 7:0.709501213844
6 8:0.693459922339
6 9:0.731997092822
6 10:0.592046610565
7 8:0.311723509715
7 9:0.0640322174219
7 10:0.841134939597
8 9:0.352350437726
8 10:0.833381620154
9 10:0.842554530784
</hsp>